Bulletin of Botanical Research ›› 2015, Vol. 35 ›› Issue (6): 836-842.doi: 10.7525/j.issn.1673-5102.2015.06.008
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SI Jing-Na;ZHOU Tao;XU Fang;BO Wen-Hao;WU Rong-Ling*
Online:2015-11-20
Published:2016-01-18
Supported by:CLC Number:
SI Jing-Na;ZHOU Tao;XU Fang;BO Wen-Hao;WU Rong-Ling*. Salt-responsive MicroRNAs in Populus euphratica by Deep Sequencing[J]. Bulletin of Botanical Research, 2015, 35(6): 836-842.
| 1.Bartel D P.MicroRNAs:genomics,biogenesis,mechanism,and function[J].Cell,2004,116(2):281-97.
2.Jones-Rhoades M W,Bartel D P,Bartel B,et al.MicroRNAs and their regulatory roles in plants[J].Annu Rev Plant Biol,2006,57:19-53.
3.Lee R C,Feinbaum R L,Ambros V.The C.elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14[J].Cell,1993,75(5):843-854.
4.Griffiths-Jones S,Russell J Grocock,Stijnvan van Dongen,et al.miRBase:microRNA sequences,targets and gene nomenclature[J].Nucleic Acids Res,2006,34(Database issue):140-144.
5.Liu H H,Tian X,Li Y J,et al.Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana[J].Rna,2008,14(5):836-843.
6.Jia Xiaoyun,Wang Wangxia,Ren Ligang,et al.Differential and dynamic regulation of miR398 in response to ABA and salt stress in Populus tremula and Arabidopsis thaliana[J].Plant Mol Biol,2009,71(1):51-59.
7.Trindade I,Capitäo C,Dalmay T,et al.miR398 and miR408 are up-regulated in response to water deficit in Medicago truncatula[J].Planta,2010,231(3):705-716.
8.Zhou Liguo,Liu Yunhua,Liu Zaochang,et al.Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa[J].J Exp Bot,2010,61(15):4157-4168.
9.Li B,Qin Y,Duan H,et al.Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica[J].J Exp Bot,2011,62(11):3765-3779.
10.Wang T,Chen L,Zhao M,et al.Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing[J].BMC Genomics,2011,15(12):367.
11.Zhang J,Xu Y,Huan Q,et al.Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response[J].BMC Genomics,2009,23(10):449.
12.Jia X,Ren L,Chen Q J,et al.UV-B-responsive microRNAs in Populus tremula[J].J Plant Physiol,2009,166(18):2046-2057.
13.Lu S F,Sun Y H,Shi R,et al.Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis[J].Plant Cell,2005,17(8):2186-2203.
14.Lopez-Hoffman L,Anten N P,Martinez-Ramos M,et al.Salinity and light interactively affect neotropical mangrove seedlings at the leaf and whole plant levels[J].Oecologia,2007,150:545-556.
15.Redondo-Gomez S,Mateos-Naranjo E,Davy A J,et al.Growth and photosynthetic responses to salinity of the salt-marsh shrub Atriplex portulacoides[J].Ann Bot,2007,100:555-563.
16.Huang X Y,Chao D Y,Gao J P,et al.A Previously unknown zine Finger Protein,DST,regulates drought and salt tolerance in rice via stomatal aperture control[J].Genes Dev,2009,23:1805-1817.
17.Zhang J L,Flowers T J,Wang S M.Meehanisms of sodium uptake by roots of higher Plants [J].Plant Soil,2010,326:45-60.
18.Yamaguchi T,Aharon G S,Sottosanto J B.Vacuolar Na+/H+ antiporter cationselectivity is regulated by calmodulin from within the vacuole in a Ca2+- and pH-dependent manner[J].PNAS,2005,102(44):16107-16112.
19.Apse M P,Aharon G S,Snedden W A.Salt tolerance conferred by overexpression of a vacuolar Na+/H+ antipoit in Arabidopsis[J].Science,1999,285:1256-1258.
20.Skriver K,Mundy J.Gene expression in response to abscisic acid and osmotic stress[J].Plant Cell,1990,2:503-512.
21.Lin H,Yang Y,Quan R,et al.PhosPhorylation of SOS3-Like Cclcium Binding Protein8 by SOS2 Protein Kinase stabilizes their Protein complex and regnlates salt tolerance in Arabidopsis[J].Plant Cell,2009,21:1607-1619.
22.Zhang B,Wang Q,Pan X.MicroRNAs and their regulatory roles in animals and plants[J].Journal Of Cellular Physiology,2007,210(2):279-289.
23.Gandikota M,Birkenbihl R P,Höhmann S,et al.The miRNA156/157 recognition element in the 3′ UTR of the Arabidopsis SBP box gene SPL3 prevents early flowering by translational inhibition in seedlings[J].The Plant Journal,2007,49(4):683-693.
24.Yu N,Cai W,Wang S,et al.Temporal control of trichome distribution by microRNA156-targeted SPL genes in Arabidopsis thaliana[J].The Plant Cell Online,2010,22(7):2322-2335.
25.Wang J,Czech B,Weigel D.miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thaliana[J].Cell,2009,138(4):738-749.
26.魏强,梁永宏,李广林.植物miRNA的进化[J].遗传,2013(3):1.
27.Ma Tao,Wang Junyi,Zhou Gongke,et al.Genomic insights into salt adaptation in a desert poplar[J].Nature Communications,2013.
28.李博生.MicorRNA调节胡杨抗逆性状的分子机制研究[D].北京:北京林业大学,2013
29.Chen S,Polle A.Salinity tolerance of Populus[J].Plant Biology,2010,12(2):317-333.
30.张云霞,石勇,王瑞刚,等.初始盐胁迫下ABA与CaM对胡杨叶片气体交换的调控[J].林业科学,2008,44(1):57-63. |
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