植物研究 ›› 2017, Vol. 37 ›› Issue (3): 351-359.doi: 10.7525/j.issn.1673-5102.2017.03.005
蒋喻林1, 刘宇婧1, 冯艺玫1, 谭淼1, 蒋天仪2, 余小芳1
收稿日期:
2016-11-14
出版日期:
2017-05-15
发布日期:
2017-06-03
通讯作者:
余小芳,E-mail:xiaofangyu@sicau.edu.cn
E-mail:xiaofangyu@sicau.edu.cn
作者简介:
蒋喻林(1990-),女,硕士研究生,主要从事植物系统进化分类研究。
基金资助:
JIANG Yu-Lin1, LIU Yu-Jing1, FENG Yi-Mei1, TAN Miao1, JIANG Tian-Yi2, YU Xiao-Fang1
Received:
2016-11-14
Online:
2017-05-15
Published:
2017-06-03
Supported by:
摘要: 选用叶绿体rbcL基因对鸢尾属植物的分类和系统发育进行了分析。以雄黄兰为外类群,对21份鸢尾属材料和GenBank下载的共49条序列采用最大简约法构建系统进化树,探讨了鸢尾属的分类系统。针对有争议的物种,聚类结果表明:马蔺与白花马蔺关系较远;扁竹兰和蝴蝶花亲缘关系较扇形鸢尾近;细锐果鸢尾和锐果鸢尾亲缘关系近,大锐果鸢尾较之远;四川鸢尾和薄叶鸢尾聚类近;西伯利亚鸢尾系内物种间聚类复杂,亲缘关系不清楚。
中图分类号:
蒋喻林, 刘宇婧, 冯艺玫, 谭淼, 蒋天仪, 余小芳. 基于rbcL序列试论鸢尾属部分物种间的系统发育关系[J]. 植物研究, 2017, 37(3): 351-359.
JIANG Yu-Lin, LIU Yu-Jing, FENG Yi-Mei, TAN Miao, JIANG Tian-Yi, YU Xiao-Fang. Phylogenetic Relationship of Several Species from Iris L. Based on rbcL Sequences[J]. Bulletin of Botanical Research, 2017, 37(3): 351-359.
1. Guo J Y,Wilson C A. Molecular phylogeny of crested Iris based on five plastid markers(Iridaceae)[J]. Systematic Botany,2013,38(4):987-995. 2. Raven P H,Axelrod D I. Angiosperm biogeography and past continental movements[J]. Annals of the Missouri Botanical Garden,1974,61(3):539-673. 3. 赵毓棠. 中国植物志[M]. 北京:科学出版社,1985:120-198.Zhao Y T. Flora of China[M]. Beijing:Science Press,1985:120-198. 4. Zhao Y T,Noltie H J,Mathew B. Iridaceae[M]. //Wu Z Y,Raven P H. Flora of China. Beijing,China,St. Louis,Missouri,USA:Science Press,Missouri Botanical Garden Press,2000:297-313. 5. Wilson C A. A Cladistic analysis of Iris series Californicae based on morphological data[J]. Systematic Botany,1998,23(1):73-88. 6. 齐耀斌,赵毓棠. 中国鸢尾属花粉形态研究[J]. 植物分类学报,1987,25(6):430-436.Qi Y B,Zhao Y T. Studies on the pollen morphology of the genus Iris in China[J]. Journal of Systematics and Evolution,1987,25(6):430-436. 7. 余小芳,张海琴,何雪梅,等. 鸢尾属12种(变种)植物花粉形态及其系统学意义[J]. 园艺学报,2010,37(7):1175-1182.Yu X F,Zhang H Q,He X M,et al. Pollen morphology of 12 species of Iris L. and it's systematic significations[J]. Acta Horticulturae Sinica,2010,37(7):1175-1182. 8. Mitió B,Halbritter H,Šoštaric R,et al. Pollen morphology of the genus Iris L. (Iridaceae) from Croatia and surrounding area:taxonomic and phylogenetic implications[J]. Plant Systematics and Evolution,2013,299(1):271-288. 9. 周永红,伍碧华,颜济,等. Iris japonica×Iris confusa种间杂种的细胞遗传学研究[J]. 云南植物研究,2003,25(4):497-502.Zhou Y H,Wu B H,Yan J,et al. Cytogenetic study on the interspecific hybrid between Iris japonica and Iris confusa(Irisaceae)[J]. Acta Botanica Yunnanica,2003,25(4):497-502. 10. Ikinci N,Hall T,Lledó M D,et al. Molecular phylogenetics of the Juno Irises,Iris subgenus Scorpiris(Iridaceae),based on six plastid markers[J]. Botanical Journal of the Linnean Society,2011,167(3):281-300. 11. 沈云光,王仲朗,管开云. 国产13种鸢尾属植物的核型研究[J]. 植物分类学报,2007,45(5):601-618.Shen Y G,Wang Z L,Guan K Y. Karyotypical studies on thirteen Iris plants from China[J]. Acta Phytotaxonomica Sinica,2007,45(5):601-618. 12. Wilson C A. Phylogenetic relationships in Iris series Californicae based on ITS sequences of nuclear ribosomal DNA[J]. Systematic Botany,2003,28(1):39-46. 13. Wheeler A S,Wilson C A. Exploring phylogenetic relationships within a broadly distributed northern hemisphere group of semi-aquatic Iris species(Iridaceae)[J]. Systematic Botany,2014,39(3):759-766. 14. 牟少华,彭镇华,郄光发,等. 部分鸢尾属植物的AFLP标记[J]. 东北林业大学学报,2011,39(1):124-126.Mu S H,Peng Z H,Qie G F,et al. Genetic diversity of Iris determined by AFLP marker[J]. Journal of Northeast Forestry University,2011,39(1):124-126. 15. 张敏,黄苏珍. 鸢尾属部分植物种质资源的RAPD分析[J]. 西北植物学报,2008,28(5):933-939.Zhang M,Huang S Z. RAPD analysis on some germplasm of Iris L. plants[J]. Acta Botanica Boreali-Occidentalia Sinica,2008,28(5):933-939. 16. 张敏,黄苏珍,仇硕,等. 鸢尾属植物遗传多样性的RAPD和ISSR分析[J]. 植物资源与环境学报,2007,16(2):6-11.Zhang M,Huang S Z,Qiu S,et al. Analysis of RAPD and ISSR on genetic diversity of Iris L. plants[J]. Journal of Plant Resources and Environment,2007,16(2):6-11. 17. Wilson C A. Phylogeny of Iris based on chloroplast matK Gene and trnK intron sequence data[J]. Molecular Phylogenetics and Evolution,2004,33(2):402-412. 18. 高宝莼,谭仲明. 四川植物志:第9卷[M]. 成都:四川民族出版社,1989:320-370.Gao B C,Tan Z M. Flora Sichuanica:vol. 9[M]. Chengdu:Sichuan National Publishing House,1989:320-370. 19. 高宝莼. 四川鸢尾属的研究[J]. 西南师范学院学报,1985(3):11-15.Gao B C. Notes on the genus Iris of Sichuan[J]. Journal of the Southeast Teachers Collage,1985(3):11-15. 20. 余小芳. 四川鸢尾属植物的系统学及种子休眠与萌发特性研究[D]. 雅安:四川农业大学,2009.Yu X F. Systematic study and seed dormancy and germination characters of Iris spieces in Sichuan[D]. Ya'an:Sichuan Agricultural University,2009. 21. 仲轶. 基于多基因组的鸢尾属部分种的系统分类研究[D]. 哈尔滨:东北林业大学,2010.Zhong Y. The system classification research base on multi-genome of some Iris species[D]. Harbin:Northeast Forestry University,2010. 22. Colasante M,Sauer W. The genus Iris L. in Latium(central Italy):general remarks on the morphological and karyological differentiation as well as on the ecological adaptation and flowering periods[J]. Linzer Biologische Beiträge,1993,25(2):1189-1204. 23. 舒焕麟,颜济,杨俊良. Iris confusa Sealy的细胞学研究[J]. 四川农业大学学报,1992,10(4):586-591.Shu H L,Yan J,Yang J L. Cytological study on Iris confusa Sealy[J]. Journal of Sichuan Agricultural University,1992,10(4):586-591. 24. 毛节绮,薛详骥. 浙江几种鸢尾科植物的染色体[J]. 浙江农业大学学报,1986,12(1):97-101.Mao J Q,Xue X J. Chromosome numbers of thirteen iridaceous species from Zhejiang province[J]. Journal of Zhejiang Agricultural University,1986,12(1):97-101. 25. Wilson C A. Phylogenetic relationships among the recognized series in Iris section Limniris[J]. Systematic Botany,2009,34(2):277-284. 26. Makarevitch I,Golovnina K,Scherbik S,et al. Phylogenetic relationships of the Siberian Iris species inferred from noncoding chloroplast DNA sequences[J]. International Journal of Plant Sciences,2003,164(2):229-237. 27. Chase M W,Soltis D E,Olmstead R G,et al. Palmer,phylogenetics of seed plants:an analysis of nucleotide sequences from the plastid gene rbcL[J]. Annals of the Missouri Botanical Garden,1993,80(3):528-580. 28. Soltis D E,Soltis P S,Chase M W,et al. Angiosperm phylogeny inferred from 18S rDNA,rbcL,and atpB sequences[J]. Botanical Journal of the Linnean Society,2000,133(4):381-461. 29. Donoghue M J,Olmstead R G,Smith J F,et al. Phylogenetic relationships of Dipsacales based on rbcL sequences[J]. Annals of the Missouri Botanical Garden,1992,79(2):333-345. 30. Chase M W,Bruijn A Y D,Cox A V,et al. Phylogenetics of asphodelaceae(asparagales):an analysis of plastid rbcL and trnL-F DNA sequences[J]. Annals of Botany,2000,86(5):935-951. 31. Reeves G,Chase M W,Goldblatt P,et al. Molecular systematics of iridaceae:evidence from four plastid DNA regions[J]. American Journal of Botany,2001,88(11):2074-2087. 32. Thompson J D,Higgins D G,Gibson T J. CLUSTAL W:improving the sensitivity of progressive multiple sequence alignment through sequence weighting,position-specific gap penalties and weight matrix choice[J]. Nucleic Acids Research,1994,22(22):4673-4680. 33. Xia X H. DAMBE5:a comprehensive software package for data analysis in molecular biology and evolution[J]. Molecular Biology and Evolution,2013,30(7):1720-1728. 34. Tamura K,Stecher G,Peterson D,et al. MEGA6:molecular evolutionary genetics analysis version 6.0[J]. Molecular Biology and Evolution,2013,30(12):2725-2729. 35. Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences[J]. Journal of Molecular Evolution,1980,16(2):111-120. 36. Tajima F. Statistical methods to test for nucleotide mutation hypothesis by DNA polymorphism[J]. Genetics,1989,123:585-595. 37. 谢航. 中国鸢尾属有关分类群的讨论及属下分类系统的修订[D]. 长春:东北师范大学,1996.Xie H. Discussion of some taxa and revision of the classification system of Chinese Iris[D]. Changchun:Northeast Normal University,1996. 38. 王玲,卓丽环. 鸢尾属部分种种子微形态特征与系统演化关系[J]. 植物研究,2006,26(3):286-290.Wang L,Zhuo L H. The relationship between seed coat micro-morphology characteristics and systemic evolution of some species of Iris[J]. Bulletin of Botanical Research,2006,26(3):286-290. 39. 王玲,卓丽环. 基于ITS序列的鸢尾属植物部分种的系统分类[J]. 东北林业大学学报,2006,34(4):54-56,75.Wang L,Zhuo L H. Systematic classification of some species of Iris based on ITS sequences[J]. Journal of Northeast Forestry University,2006,34(4):54-56,75. 40. Wilson C A. Subgeneric classification in Iris re-examined using chloroplast sequence data[J]. Taxon,2011,60(1):27-35. 41. Rodionenko G I. The genus Iris L. [M]. London:The British Iris Society,1987. 42. Mathew B. The Iris[M]. London:B. T. Batsford,1989. 43. Wilson C A,Calvin C L. An origin of aerial branch parasitism in the mistletoe family,Loranthaceae[J]. American Journal of Botany,2006,93(5):787-796. 44. 牟少华,孙振元,彭镇华. 基于叶绿体DNA trnL-F序列研究部分鸢尾属的亲缘关系[J]. 华北农学报,2010,25(5):112-116.Mu S H,Sun Z Y,Peng Z H. Relationship of Iris inferred from the chloroplast DNA trnL-F sequence variation[J]. Acta Agriculturae Boreali-Sinica,2010,25(5):112-116. 45. Goldblatt P,Manning J C. The Iris family:natural history and classification[M]. Portland:Timber Press,2008. 46. 牟少华,彭镇华,郄光发,等. 马蔺种质资源AFLP标记遗传多样性分析[J]. 安徽农业大学学报,2008,35(1):95-98.Mu S H,Peng Z H,Qie G F,et al. Genetic diversity of Iris lactea determined by AFLP marker[J]. Journal of Anhui Agricultural University,2008,35(1):95-98. 47. Waddick J W. Collecting Irises in western China[J]. Bulletin of the American Iris Society,1994(3):74-92. |
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