Background & Aims: With the development and advancement of artificial intelligence technology, large language models (LLMs), such as Kimi Chat, have begun to play a significant role in biodiversity research. LLMs’s deep learning and natural language processing technologies, augmented by human feedback reinforced learning (RLHF) and proximal policy optimization (PPO), offer new avenues for handling and analyzing large biodiversity data sets.
Progresses: We explore the application of LLMs, taking Kimi Chat as an example, in investigating biodiversity research questions, reviewing literature, designing hypotheses, organizing and analyzing data, and writing research papers, as well as its potential to enhance research efficiency and quality. (1) LLMs can quickly process vast amounts of scientific literature, helping researchers distill key information and swiftly catch up with the latest research trends in specific fields. (2) LLMs can also assist researchers in formulating research hypotheses and designing experimental protocols, thereby providing abundant scientific inspiration, broadening research perspectives, and enhancing the efficiency of the initial stages of research. (3) In terms of research design, LLMs can offer advice on data collection methods, design of experiment, and statistical analyses to ensure the scientific validity and the logic of the research design. (4) LLMs can assist in scientific writing and peer review processes by helping draft scientific papers and providing suggestions for revision and polishing to enhance the quality and readability of the papers, and it also supports researchers in understanding and responding to peer review comments and optimizing the presentation of research findings. We also discuss the challenges and limitations encountered during using LLMs, such as the need for professional judgment, the homogenization of research methods, the accuracy of data and results, and ethical issues. Additionally, we propose strategies for integrating this technology with traditional biodiversity research methods in the future.
Prospects: We demonstrates how LLMs can aid in biodiversity research, thus advancing scientific discovery and ecological conservation strategies.

Promoter is an indispensable regulatory sequence for driving gene expression in higher plants. Different promoter elements cause diverse driving efficiency and space-time specificity. Identifying the structures and functions of promoter elements contributes to a better understanding of the growth and development, multi-stress tolerance, and evolution of plants. With the development of high-throughput sequencing technologies, artificial intelligence and synthetic biology, the techniques for identifying cis-acting elements and constructing artificial biological components that meet the design requirements has gradually emerged, providing a foundation for efficient, precise, and diverse gene regulation in molecular breeding. This article targets on the application of promoter reconstruction in molecular design, introducing the detailed structure and function of higher plant promoters and the methods of cis-acting element identification. We summarized a total of 174 inducible, tissue-specific promoter elements in 27 categories and their applications on artificial modification and synthesis. At the end, we proposed the future directions and methods of the promoter designs. This review will be helpful for the further functional analyses of promoters in higher plants and their applications on molecular design breeding.

Gene editing technology has become an important tool in crop breeding. Maize, one of the globally most important food crops, has been shown with great potential in the use of gene editing technology in genome research and breeding. In this paper, we reviewed the recent progress and applications of gene editing technology in maize research, with a focus on the latest achievements in maize genome editing by CRISPR/Cas. Firstly, we introduced the basic principles and types of gene editing technology, particularly the working mechanism of the CRISPR/Cas systems, and its application advantages in maize. Secondly, we summarized the research progress of gene editing technology in maize breeding, from basic genome editing to the editing of complex multi-gene regulation, aiming at the improvement of key traits such as yield, grain quality, and stress resistance. Finally, the outstanding research work in maize gene editing in China is presented and the existing issues of gene editing technology in maize breeding are discussed, along with an outlook on future development trends.

Soil microorganisms are key drivers of carbon (C) cycling in terrestrial ecosystems not only by facilitating soil organic C decomposition and CO₂ emission, but sequestering atmospheric CO₂ into soil organic C through microbial C fixation. Due to the ubiquitous presence of microorganisms in soils, microbial C fixation is vital for terrestrial ecosystem C cycle globally. In this paper, we explored the mechanisms and determinants of soil microbial C fixation based on data collections and analyses to address the following the three issues: 1) the pathways and processes of autotrophic microbial C fixation in soil; 2) the pathways and processes of heterotrophic microbial C fixation in soil; and 3) the impacts of soil properties, ecosystem types, and climate change (i.e., warming and precipitation change) on microbial C fixation. Overall, the paper provides insights into the dynamics of C fixation in terrestrial ecosystems which is helpful for better understanding the uncertainty of soil C pool in the relationship to microbial C fixation, and which also lays a theoretical foundation for advancing of C cycling models under climate change.

Background & Aims: Urbanization is a global process accompanied by rapid environmental changes, which accelerates the evolutionary process of urban organisms and reshapes community structure and species interactions in urban ecosystems. In this paper, we reviewed relevant researches on the effects of urbanization on animals at community, population, and individual level. Then we summarized both the advances and shortcomings in the scientific urbanization literature. Finally, we provided an outlook for research in the related fields.

Review Results: Currently, relevant studies primarily reflect the level of urbanization by using the proportion of impervious area or the urban-rural gradient. By replacing time with space, the studies explore the changing trend of species composition and diversity, population demographics, genetic structure of animals, biological traits, phenology, and behavior under urbanization. Most studies focus on descriptive analysis, while mechanism-based research and applied research are relatively lacking.

Prospect: (1) Based on the observed phenomena under urbanization, future studies should conduct controlled experiments to identify the key factors affecting different animals under urbanization and explore the molecular genetic basis of urban biological evolution with molecular methods. (2) Particular attention needs to be paid to adaptive species in urban grey habitats, which are often associated with humans, pets, or food. Understanding how urban species adapt may provide direction and help predict the future effects of urbanization on animals, including human beings. (3) Since complex interspecific interaction networks can buffer the impacts of the change of animal abundance and behavior on ecological services such as pollination, seed dispersal, and pest control to a certain extent, the effects of urbanization on multitrophic networks should be studied further. (4) Finally, basic research on animal diversity and genetic structure should be extended to urban ecological planning and restoration.

Aims: The Yarlung Tsangpo River, one of the ten longest rivers in China, spans two major zoogeographic regions of the world: The Palearctic and the Oriental realms. While previous papers have focused on small portions of the river, a basin-wide-scale study to catalog its fish composition, diversity patterns, and species fluctuation is lacking. This study synthesized empirical data from field studies over the past two decades on fish diversity in the Yarlung Tsangpo River, compiled a list of fish diversity in the Yarlung Tsangpo River Basin in China, and analyzed the status of the fish diversity and the main threats to its diversity. The findings provide a scientific foundation for management and conservation of fish diversity in the Yarlung Tsangpo River Basin.

Methods: In total, 66 sections were included in this study. Of them, 58 were actually surveyed in the field, and 8 were collected from literatures; two in the upper reaches, 40 in the middle reaches, and 24 in the lower reaches; 24 in the main stream, 33 in the tributaries, 2 in the lakes, 3 in the tributary reservoirs, and 4 wetlands. These sampling sections (locations) were selected according to their geomorphological characteristics, as well as the accessibility of each location for sampling. The fish investgations were conducted from 2004 to 2023. Methods for collecting fishes included gillnets, shrimp coops, and battery-powered backpack electrofisher. After compiling the data from all of the sites, the degree of endemicity was calculated using the corrected weighted endemism index.

Results: There are 155 native species in 10 orders, 25 families, and 70 genera in the Yarlung Tsangpo River Basin. Out of all of the detected species, 29 species and one genus are endemic to the river. Five species were on China’s Key Protected Species List (Grade II); and 26 species were categorised as threatened (i.e. endangered, vulnerable, or near threatened) on the IUCN Red List of Threatened Species and China’s Biodiversity Red List. The sections with high species richness are located in the middle and lower reaches of the Yarlung Tsangpo River, while the lowest species richness is found in the Great Canyon sections. Fish fauna of the river is dominated by Qinghai-Tibetan Plateau, and South Asian fishes. The Jiaresa-Bangxin section of the Yarlung Tsangpo River Grand Canyon may be the boundary between the two major zoogeographical regions of freshwater fish. By the end of 2023, 30 species of non-native fish in 8 orders, 16 families, and 24 genera had been recorded in the natural water bodies of the Yarlung Tsangpo River Basin. Of these non-native fish species, three species were introduced to different regions within the Yarlung Tsangpo River Basin. In recent years, there has been a rapid increase in the introduction of both native fishes and non-native cold-adapted fishes through the plateau’s drainage systems.

Conclusion: Through cataloging the fish diversity in the Yarlung Tsangpo River Basin, we found that invasion of non-native fishes is the main threat to fish diversity. In the future, we should focus on fish surveys of lakes and tributaries in the lower reaches of the river, strengthen the resources for data integration, and establish a basin-level data management platform. Further, taxonomic research should be strengthened through international cooperation. Additionally, long-term monitoring of fish resources should be implemented as soon as possible to monitor fish diversity and promote conservation in the Yarlung Tsangpo River.

Aims Leaf litter and root input are two major resource of soil organic carbon (SOC) accumulation. Quantifying the effects of leaf litter and root removal on SOC pool and its multiple components has implication for understanding the mechanisms of SOC stabilization in forest ecosystem.

Methods Based on a long-term (12 years) litter removal experiment including control (CK), leaf litter removal (NL), root removal (NR), and both leaf litter and root removal (NLR) that conducted in Hunan Huitong Forest Ecosystem National Field Scientific Observation and Research Station, Chinese Academy of Sciences, we compared the relative importance of leaf litter and root removal on multiple components of SOC pool in a subtropical Cunninghamia lanceolata plantation in different season.

Important findings Although leaf litter and root removal both reduced SOC content, the relative contribution of leaf litter and root removal on multiple SOC components were different. Specifically, the NL reduced more SOC, soil mineral-associated organic carbon (MAOC), heavy fraction organic carbon (HFOC) and readily oxidizable carbon (ROC) contents than NR and NLR. While, the NR decreased more soil particulate organic carbon (POC) content than NL and NR. In contrast, the NLR had more negative effect on light fraction organic carbon (LFOC) content than other two treatments. Correlation analysis and redundancy analysis showed that SOC components contents were positively correlated with soil total nitrogen content and carbon to nitrogen ratio. Besides, seasonal variability had significant effects on POC, LFOC contents, and their contribution of multiple carbon components to SOC. Moreover, the correlation between SOC component contents and total phosphorus content and carbon to phosphorus ratio was enhanced in winter compared with summer. Taken together, our study provides new evidence for the long-term effects of long-term litter removal on SOC and its multiple components in Chinese fir plantation, which has implications for predicting the response and feedback of SOC accumulation to global changes.

Aims The dynamic monitoring of basin-scale land use and land cover changes and carbon stock estimation of the terrestrial ecosystem can provide suggestions for optimizing land utilization, enhancing terrestrial ecosystem carbon storage, and achieving the “dual carbon” objective.

Methods Based on the Landsat 5 TM and Landsat 8 OLI images from 1986 to 2022, this study employed random forest to obtain ten land use and land cover maps of the Songhua River Basin with high accuracy and conducted dynamic monitoring of land use and land cover change and its ecosystem carbon storage using an integrated valuation of ecosystem services and trade-offs (InVEST) model, Mann-Kendall tests, and Theil-Sen median trend analysis.

Important findings Results showed that farmland has the largest area in the basin, followed by forest land, grasslands, unused lands, water, construction land, sparse forest land, and shrub land. Among them, farmland, forest, and grassland are the dominant land use types in the study area. During the 1986-2022 period, the farmland expanded by 11 462.68 km² while forest land decreased by 18 567.21 km²; the construction land experienced the most significant change rate of 5.3% with an increased area of 3 505.82 km²; the change rate of the sparse forest is 4.7%, ranking second after construction land but having minimal impact on the overall basin due to limited area changes. The change rate of unused land was 4.5%, with an increased area of 5 385.43 km². There was evident spatial heterogeneity in the distribution of the terrestrial ecosystem carbon stocks within the Songhua River Basin, with high carbon stocks predominantly found in Da Hinggan Mountains and Xiao Hinggan Mountains as well as the Changbai Mountains. The median carbon stock values were observed in the Hinggan League, Songnen Plain, and Sanjiang Plain. In contrast, the areas with low carbon values were observed in Daqing and Baicheng. Over the 36 years, there was an overall decline in carbon storage within the basin, primarily concentrated in the regions initially characterized by high carbon stock values. However, the area with increased carbon stock is scattered in the basin. Notably, three recovery instances of ecosystem carbon stock occurred in 1994, 2002, and 2018 within the Songhua River Basin, all related to the changes in forest land. Based on ensuring no reduction of current forest land, it is recommended to expand forest land and continue implementing forestry projects to effectively prevent further depletion of terrestrial ecosystem carbon storage in the Songhua River Basin.

Background & Aim: There are more than 140 species of bats in China, accounting for about 10 percent of the world’s bat species. China is one of the countries with the richest bat species diversity in the world. With the development of urbanization, the species diversity of bats in China has been seriously threatened. This paper aims to discuss the current state of research on bats in China under the background of urbanization, and then, based on the threats of urbanization factors faced by bats in China, to propose targeted conservation recommendations.

Progresses: The review preliminarily defines urban bats as those whose life history is not directly controlled by humans, but whose stages such as foraging, roosting, and migration are completed in urban and surrounding areas affected by urbanization. Thus, their morphological, physiological, behavioral, and genetic adaptive characteristics are influenced by the urbanization In the process of urbanization, bats face a range of threats, including human hunting, human buildings, roads, light pollution, noise pollution, and chemical pollution; this is mainly manifested in three aspects in China: loss of habitat, utilization of biological resources, and disturbance of habitat. Despite this, preliminary bibliometric analysis indicates that research on the impacts of urbanization on bats in China is relatively lacking, and this field needs more attention.

Conservation Measures: In view of the significant impact of urbanization threats on the existence of bats in China and the scarcity of related research, it is necessary to strengthen the protection of bats in the process of urbanization in China. We suggest that research in the fields of taxonomy and conservation genomics should be intensified, special surveys for urban bats should be conducted, and the protection of bat habitats should be valued. As a result, the management of light and noise pollution should be strengthened, legislative protection should be carried out for bats that are unique to China and have a higher level of threat, and science popularization education related to bats should be carried out for the public, i to better protect bats in the process of urbanization.

Abiotic stresses such as drought, extreme temperatures, salinity, and heavy metals can cause a decrease in plant yield and quality. miRNAs are a class of endogenous non-coding small RNA with a length of about 20-24 nucleotides. By forming miRNA-mediated silencing complexes (RISCs), they cleave target mRNAs and inhibit the translation of target genes, negatively regulating eukaryotic gene expression at the post-transcriptional level. The development of high-throughput sequencing technology has enabled the identification and characterization of a large number of miRNAs that respond to abiotic stress in various plant species. Under abiotic stress, plant miRNAs bind to their target genes, forming a large gene regulatory network that controls various life activities, including growth and development, nutrient absorption and distribution, signal transduction, and oxidative stress, thereby improving plant stress resistance. Understanding the function and regulatory mechanisms of miRNAs is crucial for crop improvement and stress-resistant breeding through genetic engineering. This review summarized the advances in the biosynthesis and mechanisms of plant miRNAs in recent years, with emphasis on the identification and function of miRNAs involved in regulating plant response to abiotic stress. Possible future research directions in this field are also discussed.

With the sharp change of the global climate, the ecological environment for plant is becoming increasingly harsh, therefore the molecular mechanisms underlying how circadian synergistically interacts with light or temperature receptors to transmit environmental signals and rhythmically regulate various growth and development process received widespread attention. As an endogenous timer of plants, the core oscillator of circadian clock is composed of multiple coupled transcriptional-translational feedback loops (TTFL), and it is modified from transcription, post-transcription, translation, post-translation to epigenetic levels. These multi-precise regulatory mechanisms ensure that the circadian clock can be synchronized and reset by external signals, so that the endogenous rhythm matches with external cycles, thereby endowing plants with the ability to optimize resource utilization and tend towards the optimal growth, which also has an important significance for guiding the genetic improvement and domestication of crops. In this review, we summarized the multi-level of regulatory mechanisms of core oscillator as well as the molecular function of circadian homologous genes in crops, thoroughly described the interaction network between the circadian clock and the light and temperature signal pathways and give prospects for molecular breeding based on the opinion, which provides new ideas for expanding the environmental adaptability and optimizing agronomic traits of crops.

Charophytes and land plants form a monophyletic group known as Streptophyta. Fossil and molecular evidences suggest that land plants originated from charophytes. This article summarizes the 14 sequenced genomes of 10 species in charophytes and reviews the molecular mechanisms involved in the terrestrialization of plants, revealing the genomic basis for the pre-adaptation of charophytes that included the expansion of gene families regulating plant hormone signal transduction and encoding key transcription factors, as well as horizontal gene transfer. We elucidate with examples the helpful role of the whole-genome data of charophytes in transcriptomic and functional genomic discovery. Moreover, we discuss the importance of telomere-to-telomere genomes and pan-genomes for a deeper understanding of plant terrestrialization and the future directions of integrating genomic data with biological experiments for deciphering the function and origin of charophyte genes.

Functional gene expression is a basic life process that connects coding information of a gene to protein products. The level of gene expression is considered as a quantitative trait between genotype and phenotype and plays an important role in plants response to climatic and environmental changes. First, this review systematically comments on regulatory elements of gene expression in plant species and empirical evidence, including the effects of transcription factors and small RNAs on gene expression regulation. Secondly, this review discusses the eQTLs mapping for regulatory elements of gene expression through gene expression-based GWAS analysis and the limitations of this method. This review then analyzes the intraspecific variation of gene expression in theory under the processes of mutation, drift and selection and the testing methods. The review also analyzes the interspecific evolution of gene expression under the mutation and drift processes or under the phylogeny-based drift-selection processes, and the testing methods. Finally, the review discusses the regulation of gene expression by plant mating system. Selfing reduces effective population size, mutation rate, recombination rate and the competition from exogenous pollen, and changes the efficacy of natural selection in gametophytic and sporophytic phases. Selfing regulates intraspecific gene expression variation and interspecific gene expression evolution. The whole review comprehensively comments on theoretical and practical research progress and existing questions, which aids in our deep understanding of plant gene expression regulation and evolution mechanisms.

The external environment severely affects growth and development of plants. In recent years, the increasing extreme climates have posed a serious threat to the growth and development of plants. Understanding the regulatory mechanisms of plant stress tolerance is of great significance for ensuring the survival and development of plants (especially economic crops) and their yields. Alternative splicing is an important post-transcriptional regulatory mechanism and plays an important role in the diversity of plant gene functions and stress resistance. At present, a variety of alternative splicing variants of stress-resistant related genes have been identified in different plant species, and several regulatory mechanisms involved in alternative splicing have been elucidated, effectively advancing the relevant theoretical basis for plant stress resistance in plants. This paper reviews the types and splicing mechanisms of alternative splicing in plants, highlights the recent progress in alternative splicing regulation of plant responses to abiotic stress, and provides a prospect for the future direction of research on alternative splicing in plants.

Background: Tardigrades, commonly known as water bears, are microscopic invertebrates inhabiting diverse environments across marine, freshwater, and terrestrial ecosystems. As essential components of microfauna communities, they are renowned for their extraordinary extremotolerant adaptability and occupy multiple trophic levels within micro-food webs, indicating their significant ecological roles. Despite significant advancements made in understanding tardigrade biodiversity, identification methodologies, physiological and ecological traits recently, a comprehensive summaries remains lacking.

Bibliometric analyses & Perspective: Through bibliometric analyses of global tardigrade research over the past three decades, this review systematically summarizes the research progress in the new species discovery, identification methods, distribution characteristics, and ecological functions of tardigrades. The primary findings encompass: (1) Up to 2024, 1,488 documented tardigrade species inhabit a wide range of aquatic and terrestrial ecosystems, including moss, soil, marine environments, polar regions, and even anthropogenic habitats, with new species being continuously discovered. (2) Current identification methods remain predominantly morphology-based, while standardized molecular tools for phylogenetic resolution are critically underdeveloped, severely constrain taxonomic advancements. (3) We describe characteristics in aquatic ecosystems and unique adaptive mechanisms to global change stressors including climate warming and atmospheric nitrogen deposition. (4) Preliminary summaries reveal their ecological roles in micro-food webs through interactions with meiofauna and microbial communities.

Future prospects: We propose three critical research priorities: (1) Emphasizing the need to improve molecular biology research methods; (2) Exploring the distribution characteristics across different ecosystems on large spatial and long-term temporal scales; (3) Elucidating their position in micro-food webs and ecological functions.

INTRODUCTION Trehalose-6-phosphate synthase (TPS) is a key enzyme involved in the synthesis of trehalose and has been reported to participate in regulating photosynthesis, carbohydrate metabolism, growth and development, and stress responses in various species. Currently, reports on TPS genes in soybean are scarce.

RATIONALE  TPS is a stable non-reducing disaccharide, whose synthesis, decomposition and regulation not only provide energy for plant, but also play an important role in plant growth and development and stress tolerance. The in-depth study of soybean TPS genes and its relationships with salt stress is of great significance in elucidating the molecular mechanism of soybean salt tolerance and improving soybean yield.

RESULTS This study identified 20 soybean TPS genes and their associated 10 conserved protein motifs in the soybean genome. Molecular analysis of the promoter elements revealed that the TPS gene promoters are rich in stress-responsive elements. After salt stress treatment, the expression of 17 TPS genes changed, with 12 genes up-regulated and 5 genes down-regulated. Haplotype and selection analyses revealed two major allelic variations in TPS8, TPS13, TPS15, TPS17, and TPS18. Notably, variants carrying TPS15^H2, TPS13^H2, TPS17^H2, and TPS18^H2 were significantly enriched in improved cultivars that underwent strong artificial selection.

CONCLUSION This study reveals the molecular characteristics of the soybean TPS gene family, their expression patterns under salt stress, and their evolutionary history, providing a theoretical basis and genetic material for further elucidating the functions of soybean TPS genes and breeding salt-tolerant soybean varieties.

TPS genes were subjected to intense artificial selection. The natural variations of TPS8, TPS13, TPS15, TPS17, and TPS18 have been subjected to strong artificial selection during soybean domestication and improvement, with the variants carrying TPS15^H2, TPS13^H2, TPS17^H2, and TPS18^H2 being heavily enriched in improved cultivars.

INTRODUCTION Tomato (Solanum lycopersicum), a significant warm-season and water-dependent vegetable crop, is extensively cultivated worldwide. Whether grown in open fields or protected environments, tomatoes frequently encounter various environmental stresses, including drought and low temperatures, which significantly impact their yield and quality. Transcription factors play a pivotal role in plant stress responses by modulating the expression of specific target genes, thereby transmitting perceived stress signals downstream. WRKY transcription factors in tomatoes are known to regulate responses to multiple abiotic stresses. However, the specific role of the tomato SlWRKY45 in abiotic stress responses remains unclear.

RATIONALE Studies have demonstrated that WRKY transcription factors play a crucial regulatory role in plant responses to abiotic stress. As an important economic vegetable crop, tomato is susceptible to various environmental stresses during its growth and development. By genetically overexpressing SlWRKY45 in tomato and investigating its function under low-temperature and drought stress conditions, the findings can provide a theoretical foundation for understanding the complex regulatory mechanisms of WRKY transcription factors. Additionally, this research offers valuable candidate genes for breeding stress-resistant tomato varieties.

RESULTS Expression analysis revealed that low-temperature, drought, and abscisic acid (ABA) treatments significantly induced the expression of SlWRKY45. Overexpression of SlWRKY45 enhanced the resistance of tomato plants to drought and low-temperature stresses. Under drought and low-temperature conditions, the photosynthetic indices, antioxidant enzyme activities, and proline (Pro) contents in SlWRKY45 overexpression lines were significantly higher than those in wild-type (WT) plants. Conversely, the accumulation of reactive oxygen species (ROS) and malondialdehyde (MDA) levels in SlWRKY45-OE plants was significantly lower than in WT plants under the same stress conditions. Transcriptome data analysis indicated that SlWRKY45 regulates tomato's response to low-temperature stress primarily by influencing antioxidant enzyme activities and stress response pathways. Dual-luciferase assays demonstrated that SlWRKY45 could directly activate the expression of SlPOD1. Furthermore, the interaction between SlWRKY45 and SlWRKY46 was confirmed through yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays.

CONCLUSION Our findings demonstrate that SlWRKY45 positively regulates drought resistance and low-temperature tolerance in tomato. Additionally, SlWRKY45 can interact with SlWRKY46 and directly activate the expression of SlPOD1. These results offer valuable insights for further research into the regulatory mechanisms underlying abiotic stress responses and provide potential gene resources for genetic improvement through molecular breeding.

Phenotypes of SlWRKY45-overexpressing and wild-type plants under drought and low-temperature treatments

Aims The increases in drought intensity and frequency severely threaten structure and functioning of terrestrial ecosystems. To ensure the normal functioning of ecosystems under such scenarios, it is critically needed to understand the spatial-temporal characteristics of ecosystem productivity response and resilience under meteorological droughts.

Methods The intensity and frequency of meteorological droughts were quantified by standardized precipitation evapotranspiration index (SPEI) of the Hai River Basin (HRB). Net primary productivity (NPP) of natural ecosystems was estimated based on Carnegie-Ames-Stanford Approach (CASA). We quantitatively analyzed the relationship between NPP and SPEI, evaluated the drought risk of natural vegetation and the resilience of vegetation after drought.

Important findings (1) Both NPP and normalized differential vegetation index (NDVI) in the HRB showed significantly increasing trend. (2) The lagging time of NPP response to droughts follow an order of grassland and savanna < deciduous broadleaf forest and woody savanna < deciduous-evergreen mixed forest and closed shrubland. (3) Drought risk followed an order of grassland > closed shrubland > woody savanna > deciduous broadleaf forest > savanna > deciduous-evergreen mixed forest. (4) More than 75% of the vegetation in the HRB showed no continuous distinctly low NPP status one month after the droughts, indicating relatively strong resilience. The resilience of forests was stronger than shrub or herbaceous vegetation, which showed opposite temporal pattern within each growing season but shared similar increasing trend interannually. Response and resilience characteristics of NPP varied with vegetation types and drought intensity. Ecosystem stability of the HRB could be improved by adjusting the afforestation and grass restoration measures based on vegetation drought risk and resilience, optimizing vegetation structure, and enhancing species diversity.

Background: Passive acoustic monitoring (PAM) technology has become increasingly significant in wildlife research due to its non-invasive nature and capacity for continuous monitoring. A key taxonomic group for biodiversity and environmental monitoring using PAM are the order Chiroptera, commonly known as bats, with their unique echolocation abilities, nocturnality, and high sensitivity to environmental changes.

Progress: This review aims to comprehensively explore the applications of PAM in Chiropteran research and note the scientific and ecological breakthroughs that this new tool facilitates. We analyze the advantages and limitations of PAM, and summarize methods for effectively collecting and processing acoustic data to estimate and monitor bat diversity, activity patterns, population dynamics, habitat selection, and distribution. The review concludes with case studies from the literature that compare the impact of different environmental factors on bat diversity and activity, and that discuss how these variables affect data collection.

Prospects: This review concludes its assessment by noting the challenges that PAM faces in practical applications; by exploring the future prospects of the technology and its potential contributions to biodiversity conservation; and by proposing future research directions including technological innovation, citizen science involvement, and monitoring strategy optimization. These suggestions will help further advance the application of PAM technology in bat conservation and management by contributing to the protection of biodiversity.

Aims The rhizosphere microbial network characteristics profoundly influence various ecological processes including soil carbon turnover, nutrient cycling and plant growth. Mycorrhizal types and root traits are crucial factors that affect plant growth and soil nutrient acquisition strategies. However, it is currently unclear how the root characteristics of different mycorrhizal tree species affect the topological structure of the rhizosphere microbial network.

Methods The present study focused on the secondary forest and investigated the root traits and rhizosphere soil microorganisms of five arbuscular mycorrhizal (AM) tree species and seven ectomycorrhizal (EcM) tree species to explore the impacts of mycorrhizal types on root traits and rhizosphere microbial network characteristics.

Important findings (1) Specific root length, root nitrogen, and root phosphorus contents of AM tree species were all higher than those of EcM tree species, while root tissue density, root diameter and root nitrogen-to-phosphorus ratio showed no significant differences between the two mycorrhizal types. (2) The relative abundance of Rozellomycota in the rhizosphere of AM tree species was significantly higher than that of EcM tree species, while the relative abundance of Bacteroidota was significantly lower in AM tree species compared to EcM tree species. There was no significant difference in the biodiversity of rhizosphere microbial communities between different mycorrhizal type tree species. (3) The rhizosphere microbial networks of EcM tree species were more complex, and the negative bacterial cohesions of EcM tree species were significantly stronger than AM tree species. (4) The specific root length of AM tree species and the root diameter and root nitrogen-to-phosphorus ratio of EcM tree species were identified as key factors predicting rhizosphere microbial network. These findings suggest that the mycorrhizal type of tree species significantly influences root traits such as specific root length and nutrient content to regulate the relationship between root traits and rhizosphere microbial communities and microbial network complexity.

There are 94 cetacean species worldwide, which represent one of the most enigmatic and threatened groups among mammals. Throughout their transition from land to water, cetaceans have evolved numerous morphological, life history, and ecological traits that enhance their adaptability to aquatic environments. However, a comprehensive global database of cetacean ecological characteristics is still lacking. Our study systematically reviews books, literature, and other data resources to collect and compile cetacean characteristic data, including 15 morphological traits, 12 life-history traits, and 11 ecological traits. Based on the collected data, we quantified the trait completeness for each species and employed phylogenetic linear regression model to explore the factors influencing the ratio of data completeness. The completeness of the morphological traits ranges from 72.15% to 100.00%, life history traits from 17.72% to 100.00%, and ecological traits from 25.32% to 100.00%. The regression analyses showed that species described earlier and inhabiting nearshore habitats tend to exhibit higher data completeness. This dataset provides essential foundational information for research in cetacean ecology, conservation biology, and evolutionary biology. It also serves as a significant platform for data sharing and communication in regional and global cetacean conservation efforts.