Integrative Biology Journals

JOURNAL OF FORESTRY RESEARCH ›› 2026, Vol. 37 ›› Issue (1): 1-.DOI: 10.1007/s11676-026-02055-6

• Review Article •    

Genetic innovations in forest tree breeding: combating nematode threats and enhancing climate resilience

Muhammad Anas Bin Abdul Qadeer1, Muhammad Sajad1, Mamar Laeeq Zia2, Ahmed A. El‑Mansi3, Rashid Iqbal4,5, Muhammad Sameeullah6,7, Noreen Aslam8, Mustafa İmren9, Vahdettin Çiftçi6, Abdul Fatah A. Samad10, Mohammad Tahir Waheed11, Tanveer Hussain Turabi12, Abdelfattah A. Dababat13, Iftikhar Ali1, Usman Aziz14, Hafiz Ghulam Muhu‑Din Ahmed1,15, Ismanizan Ismail16,17   

  1. 1Department of Plant Breeding and Genetics, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Punjab 63100, Pakistan 

    2Hubei Provincial Key Laboratory for Protection and Application of Special Plant Germplasm in Wuling Area of China, College of Life Sciences, South-Central Minzu University, Wuhan 430074, People’s Republic of China 

    3Biology Department, Faculty of Science, King Khalid University, 61413 Abha, Saudi Arabia 

    4Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Punjab 63100, Pakistan

    5Department of Life Sciences, Western Caspian University, Baku, Azerbaijan 

    6Department of Field Crops, Faculty of Agriculture, Bolu Abant Izzet Baysal University, 14030 Bolu, Turkey 

    7Center for Innovative Food Technologies Development, Application and Research, Bolu Abant Izzet Baysal University, 14030 Bolu, Turkey 

    8Department of Biology, Faculty of Science and Literature, Bolu Abant Izzet Baysal University, 14030 Bolu, Turkey

    9Department of Plant Protection, Faculty of Agriculture, Bolu Abant Izzet Baysal University, 14030 Bolu, Turkey 

    10Department of Biosciences, Faculty of Science, Universiti Teknologi Malaysia (UTM), Skudai, 81310 Johor, Bahru Johor, Malaysia

    11Department of Biochemistry, Quaid-I-Azam University, Islamabad, Pakistan 

    12Institute of Forest Sciences, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Punjab 63100, Pakistan 

    13International Maize and Wheat Improvement Center (CIMMYT), Emek, P.O. Box 39, 06511 Ankara, Türkiye 

    14Faculty of Agriculture and Environment, National Cotton Breeding Institute, The Islamia University of Bahawalpur, Punjab 63100, Pakistan 

    15Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205, People’s Republic of China 

    16Institute of Systems Biology, Universiti Kebangsaan Malaysia, UKM, 43600 Bangi, Selangor, Malaysia

    17Department of Biological Sciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, UKM, 43600 Bangi, Selangor, Malaysia

  • Received:2025-04-05 Accepted:2025-09-01 Online:2026-04-15 Published:2026-01-01
  • Supported by:
    The authors extend their appreciation to the Deanship of Research and Graduate Studies of King Khalid University for funding this work through large group research project under a Grant Number (R.G.P. 2/6/46).

Abstract: In the context of accelerating climate change, this review comprehensively explores genetic innovations in forest tree breeding emphasizing their potential for forest restoration, nematode resistance and climate resilience. Rising global temperatures, extreme weather and pollution are degrading forest ecosystems, limiting biodiversity, carbon sequestration, and ecological stability. While traditional breeding has delivered a valuable genetic foundation but its long cycles and limited precision necessitate integration with advanced tools. Modern approaches such as CRISPR/Cas genome editing, genomic selection (GS), marker-assisted selection (MAS) and epigenetic breeding now enable targeted improvement of traits including drought tolerance, pest disease resistance, wood quality and climate adaptability. Recent advances highlight polygenic nematode resistance mechanisms, transcription factor–mediated defense regulation and secondary metabolite–based anti-pathogen strategies. Assisted Gene Flow (AGF) including pollen-based assisted migration, offers complementary pathways to enhance genetic diversity and adapt populations to future climates. Epigenetic mechanisms such as DNA methylation, histone modifications, small RNAs and epi-miRNAs are increasingly recognized for their role in stress memory, hybrid vigor and rapid heritable adaptation without altering DNA sequence. Integrating multi-omics platforms with these breeding strategies improves trait prediction, elucidates gene–environment interactions and accelerates genetic gain. The review also addresses key challenges such as high implementation costs, regeneration bottlenecks in woody species, ecological trade-offs, and the stability of induced modifications. A coordinated approach among scientists, policymakers and forest managers is essential to deploy these innovations, restore forest health, mitigate climate change and nematode threats, and safeguard ecosystem services for future generations.

Key words: Forest tree breeding, Climate change adaptation, Genetic engineering, CRISPR/Cas, Nematode resistance, Epigenetics, Assisted gene flow