JOURNAL OF FORESTRY RESEARCH ›› 2023, Vol. 34 ›› Issue (4): 1095-1106.DOI: 10.1007/s11676-022-01534-w
• Original Paper • Previous Articles Next Articles
Anna De Rogatis1,a, Fulvio Ducci2, Serena Guerri2,3, Angela Teani2, Roberta Proietti2
Received:
2022-03-01
Accepted:
2022-06-29
Online:
2024-10-16
Contact:
Anna De Rogatis
Anna De Rogatis, Fulvio Ducci, Serena Guerri, Angela Teani, Roberta Proietti. Genotyping ex situ trees of Abies nebrodensis translocated from the original Sicilian population to enrich the gene pool[J]. JOURNAL OF FORESTRY RESEARCH, 2023, 34(4): 1095-1106.
Anna De Rogatis, Fulvio Ducci, Serena Guerri, Angela Teani, Roberta Proietti. [J]. 林业研究(英文版), 2023, 34(4): 1095-1106.
1 |
DOI |
2 |
DOI |
3 |
DOI |
4 |
DOI |
5 |
|
6 |
|
7 |
DOI |
8 |
DOI |
9 |
DOI |
10 |
DOI |
11 |
Costa R, Pereira G, Garrido I, Tavares-de-Sousa MM, Espinosa F (2016) Comparison of RAPD, ISSR, and AFLP molecular markers to reveal and classify orchardgrass (Dactylis glomerata L.) germplasm variations. PLoS ONE 11(4):1–15
|
12 |
Dent AE, Von Holdt BM (2012) STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv Genet Resour 4: 359–361
|
13 |
DOI |
14 |
DOI |
15 |
Ducci F (2014) Species restoration approach, chapter 151 Species restoration through dynamic ex situ conservation: Abies nebrodensis as a model. In: Genetic considerations in ecosystem restoration using native tree species State of the World’s Forest Genetic Resources – Thematic Study Ed Bozzano et al Rome FAO and Bioversity International, pp 225–232
|
16 |
DOI |
17 |
Ehrich D, Gaudeul M, Assefa A, ehrich Koch MA, Mummenhoff K, Nemomissa S, Intrabiodiv Consortium, Brochmann C, 2007 Ehrich D, Gaudeul M, Assefa A,ehrich Koch MA, Mummenhoff K, Nemomissa S, Intrabiodiv Consortium, Brochmann C (2007) Genetic consequences of Pleistocene range shifts: contrast between the Arctic, the Alps and the East African mountains. Mol Ecol 16(12): 2542–2559
|
18 |
Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14 (8): 2611–2620
|
19 |
Fady B, Aravanopoulos FA, Alizoti P, Mátyás C, von Wühlisch G, Westergren M, Belletti P, Cvjetkovic B, Ducci F, Huber G, Kelleher CT, Khaldi A, Dagher Kharrat MB, Kraigher H, Kramer K, Mühlethaler U, Peric S, Perry A, Rousi M, Sbay H, Stojnic S, Tijardovic M, Tsvetkov I, Varela MC, Vendramin GG, Zlatanov T (2016) Evolution-based approach needed for the conservation and silviculture of peripheral forest tree populations. Forest Ecol Manag 375: 66–75
|
20 |
Farjon A (2018) The Kew review: Conifers of the world. Kew Bull 73(8).
|
21 |
Felsenstein J (2004) Inferring phylogenies. Book Sinauer Associates Inc Publishers Sunderland Massachusetts
|
22 |
Fuentes-Utrilla P, Valbuena-Carabana M, Ennos R, Gil L (2014) Population clustering and clonal structure evidence the relict state of Ulmus minor Mill. in the Balearic Islands. Heredity 113: 21–31
|
23 |
DOI |
24 |
Gerber S, Mariette S, Streiff R, Bodénès C, Kremer A (2000) Comparison of microsatellites and amplified fragment length polymorphism markers for parentage analysis. Mol Ecol 9:1037–1048
|
25 |
Gussone G (1843) Florae Siculae synopsis. I-Il. - Napoli P II: pp. 647; add. pp. 883
|
26 |
DOI |
27 |
Holland BR, Clarke AC, Meudt HM (2008) Optimizing automated AFLP scoring parameters to improve phylogenetic resolution. Syst Biol 57(3):347–366
|
28 |
Hubisz MJ, Falush D, Stephens M, Pritchard JK (2009) Inferring weak population structure with the assistance of sample group information. Mol Ecol Resour 9 (5):1322–1332
|
29 |
Jakobsson M, Rosenberg NA (2007) CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23 (14): 1801–1806
|
30 |
DOI |
31 |
DOI |
32 |
DOI |
33 |
Kopelman NM, Mayzel J, Jakobsson M , Rosenberg NA, Mayrose I (2015) Clumpak: a program for identifying clustering modes and packaging population structure inferences across K. Mol Ecol Resour 15(5):1179–91
|
34 |
DOI |
35 |
Latch EK, Dharmarajan G, Glaubitz JC, Olin ER, Rhodes JR (2006) Relative performance of Bayesian clustering software for inferring population substructure and individual assignment at low levels of population differentiation. Conserv Genet 7:295–302
|
36 |
DOI |
37 |
DOI |
38 |
Meirmans PG, Van Tienderen PH (2004) GenoType and GenoDive: two programs for the analysis of genetic diversity of asexual organisms. Mol Ecol Notes 4:792–794
|
39 |
DOI |
40 |
Meudt HM, Clarke AC (2007) Almost forgotten or latest practice? AFLP applications, analyses and advances. Trends Plant Sci12 (3)
|
41 |
|
42 |
Morandini R, Ducci F, Menguzzato G (1994) Abies nebrodensis (Lojac) Mattei–Inventario 1992. Ann Ist Sper Selv XXII:5–51
|
43 |
DOI |
44 |
DOI |
45 |
Pasta S, Sala G, La Mantia T, Bondì C, Tinner W (2020) The past distribution of Abies nebrodensis (Lojac) Mattei: results of a multidisciplinary study. Veget Hist Archaeobot 29:357–371
|
46 |
DOI |
47 |
DOI |
48 |
DOI |
49 |
Pritchard JK, Wen X, Falush D (2010–2012) Documentation for STRUCTURE software Available with the program at: http://pritchbsduchicagoedu/structurehtm
|
50 |
DOI |
51 |
DOI |
52 |
DOI |
53 |
Roncallo PF, Beaufort V, Larsen AO, Dreisigacker S, Echenique V (2019) Genetic diversity and linkage disequilibrium using SNP (KASP) and AFLP markers in a worldwide durum wheat (Triticum turgidum L var durum) collection. PLoS ONE 14(6)
|
54 |
Sánchez-Gómez P, Jiménez JF, Cánovas1 JL, Vera1 JB, Hensen I, Aouissat M (2018) Genetic structure and phylogeography of Juniperus phoenicea complex throughout Mediterranean and Macaronesian regions: different stories in one. Ann For Sci 75:75
|
55 |
DOI |
56 |
|
57 |
Schlüter PhM, Harris SA (2006) Analysis of multilocus fingerprinting data sets containing missing data. Mol Ecol Notes 6:569–572
|
58 |
DOI |
59 |
DOI |
60 |
Semerikova SA, Lascoux M, Semerikov VL (2012) Nuclear and cytoplasmic genetic diversity reveals long-term population decline in Abies semenovii, an endemic fir of central Asia. Can J For Res 42:2142–2152
|
61 |
Semerikova SA, Semerikov VL (2011) Genetic variability of Siberian fir Abies sibirica Ledeb inferred from AFLP markers. Russ J Genet 47 (2):241–246
|
62 |
Semerikova SA, Semerikov VL (2016) Phylogeny of firs (genus Abies, Pinaceae) based on multilocus nuclear markers (AFLP). Russ J Genet 52 (11):1164–1175
|
63 |
DOI |
64 |
Sokal RR, Rohlf FJ (1995) Biometry: the principles and practice of statistics in biological research 3rd Edition WH Freeman and Co New York: pp 896
|
65 |
Tang SQ, Dai WJ, Li MS, Zhang Y, Geng YP, Wang L, Zhong Y (2008) Genetic diversity of relictual and endangered plant Abies ziyuanensis (Pinaceae) revealed by AFLP and SSR markers. Genetica 133:21–30
|
66 |
Thomas P (2017) Abies nebrodensis. The IUCN red list of threatened species 2017: e.T30478A91164876. Downloaded on 10 November 2021. https://doi.org/10.2305/IUCN.UK.2017-2.RLTS.T30478A91164876.en
|
67 |
Vanden Broeck A, Cox K, Melosik I, Maes B, Smets K (2018) Genetic diversity loss and homogenization in urban trees: the case of Tilia × europaea in Belgium and the Netherlands. Biodivers Conserv 27:3777–3792
|
68 |
DOI |
69 |
Venturella G, Mazzola P, Raimondo FM (1997) Strategies for the conservation and restoration of the relict population of Abies nebrodensis (Lojac.) Mattei Bocconea 7:417–425
|
70 |
|
71 |
DOI |
72 |
Wang J, Abbott RJ, Ingvarsson PK, Liu JQ (2014) Increased genetic divergence between two closely related fir species in areas of range overlap. Ecol Evol 4 (7):1019–1029
|
73 |
Wang XR, Chhatre VE, Nillson MC, Song W, Zackrisson O, Szmidt AE (2003) Island population structure of Norway Spruce (Picea abies) in northern Sweden. Int J Plant Sci 164 (5):711–717
|
74 |
Wessa P (2021) Free statistics software office for research development and education V 1.2.1 URL: https://wwwwessanet/
|
75 |
Williams MI, Dumroese RK (2013) Preparing for climate change: forestry and assisted migration. J For 111: 287–297
|
76 |
Woodhead W, Russell J, Squirrell J, Hollingsworth PM, Mackenzie K, M Gibby M, Powell W (2005) Comparative analysis of population genetic structure in Athyrium distentifolium (Pteridophyta) using AFLPs and SSRs from anonymous and transcribed gene regions. Mol Ecol 14:1681–1695
|
77 |
Xu SQ, Tauer CG, Nelson CD (2008) Genetic diversity within and among populations of shortleaf pine (Pinus echinata Mill.) and loblolly pine (Pinus taeda L.). Tree Genet Genomes 4(4):859–868
|
78 |
Xue XM, Wang YH, Korpelainen H, Li CY (2005) Assessment of AFLP-based genetic variation in the populations of Picea asperata. Silvae Genet 54 (1):24–30
|
79 |
Yang AH, Wei N, Fritsch PW, Yao XH (2016) AFLP genome scanning reveals divergent selection in natural populations of Liriodendron chinense (Magnoliaceae) along a latitudinal transect front. Plant Sci 7:698
|
80 |
DOI |
81 |
DOI |
No related articles found! |
Viewed | ||||||
Full text |
|
|||||
Abstract |
|
|||||