[an error occurred while processing this directive] [an error occurred while processing this directive] [an error occurred while processing this directive]
[an error occurred while processing this directive]

林业研究(英文版) >

2023 , Vol. 34 >Issue 6: 1941 - 1950

DOI: https://doi.org/10.1007/s11676-023-01612-7

  • Caixia Liu 1, 2 ,
  • Sui Wang 2, 3 ,
  • Yi Liu 2 ,
  • Meng Wang 2 ,
  • Erqin Fan 2, 4 ,
  • Chen Liu 2 ,
  • Shikai Zhang 2 ,
  • Chuanping Yang 2 ,
  • Junhui Wang 4 ,
  • Heike W. Sederoff 5 ,
  • Xiangling You 1 ,
  • Vincent L. Chiang 2, 6 ,
  • Su Chen 2 ,
  • Ronald R. Sederoff 2, 6, q ,
  • Guanzheng Qu 2, r
展开

收稿日期: 2023-01-12

  录用日期: 2023-03-02

  网络出版日期: 2024-10-16

收起

Exceptionally high genetic variance of the doubled haploid (DH) population of poplar

  • Caixia Liu 1, 2 ,
  • Sui Wang 2, 3 ,
  • Yi Liu 2 ,
  • Meng Wang 2 ,
  • Erqin Fan 2, 4 ,
  • Chen Liu 2 ,
  • Shikai Zhang 2 ,
  • Chuanping Yang 2 ,
  • Junhui Wang 4 ,
  • Heike W. Sederoff 5 ,
  • Xiangling You 1 ,
  • Vincent L. Chiang 2, 6 ,
  • Su Chen 2 ,
  • Ronald R. Sederoff 2, 6, q ,
  • Guanzheng Qu 2, r
Expand
  • 1 College of Life Science, Northeast Forestry University, 150040, Harbin, People’s Republic of China
  • 2 State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, People’s Republic of China
  • 3 Key Laboratory of Soybean Biology in Chinese Ministry of Education, Northeast Agricultural University, 150030, Harbin, People’s Republic of China
  • 4State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, 100091, Beijing, People’s Republic of China
  • 5 Department of Plant and Microbial Biology, North Carolina State University, 27695, Raleigh, NC, USA
  • 6 Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University, 27695, Raleigh, NC, USA
q
r

Received date: 2023-01-12

  Accepted date: 2023-03-02

  Online published: 2024-10-16

Copyright

© The Author(s) 2023
Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
Fold

本文引用格式

Caixia Liu , Sui Wang , Yi Liu , Meng Wang , Erqin Fan , Chen Liu , Shikai Zhang , Chuanping Yang , Junhui Wang , Heike W. Sederoff , Xiangling You , Vincent L. Chiang , Su Chen , Ronald R. Sederoff , Guanzheng Qu . [J]. 林业研究(英文版), 2023 , 34(6) : 1941 -1950 . DOI: 10.1007/s11676-023-01612-7

Abstract

Doubled haploid (DH) plants have been widely used for breeding and biological research in crops. Populus spp. have been used as model woody plant species for biological research. However, the induction of DH poplar plants is onerous, and limited biological or breeding work has been carried out on DH individuals or populations. In this study, we provide an effective protocol for poplar haploid induction based on an anther culture method. A total of 96 whole DH plant lines were obtained using an F1 hybrid of Populus simonii ×  P. nigra as a donor tree. The phenotypes of the DH population showed exceptionally high variance when compared to those of half-sib progeny of the donor tree. Each DH line displayed distinct features compared to those of the other DH lines or the donor tree. Additionally, some excellent homozygous lines have the potential to be model plants in genetic and breeding studies.

Key words： Populus; Anther culture; Doubled haploid; Genetic variance; Flow cytometry

[an error occurred while processing this directive]

参考文献

原文顺序 | 文献年度倒序 | 文中引用次数倒序
1
Addison CK, Angira B, Cerioli T, Groth DE, Richards JK, Linscombe SD, Famoso AN. Identification and mapping of a novel resistance gene to the rice pathogen. Cercospora Janseana Theor Appl Genet, 2021, 134(7): 2221-2234,

DOI

2
An G. High efficiency transformation of cultured tobacco cells. Plant Physiol, 1985, 79(2): 568-570,

DOI

3
Ardiel GS, Grewal TS, Deberdt P, Rossnagel BG, Scoles GJ. Inheritance of resistance to covered smut in barley and development of a tightly linked SCAR marker. Theor Appl Genet, 2002, 104(2–3): 457-464,

DOI

4
Arif MAR, Shokat S, Plieske J, Ganal M, Lohwasser U, Chesnokov YV, Kocherina NV, Kulwal P, Kumar N, McGuire PE, Sorrells ME, Qualset CO, Börner A. A SNP-based genetic dissection of versatile traits in bread wheat (Triticum aestivum L.). Plant J, 2021, 108(4): 960-976,

DOI

5
Bordes J, Charmet G, De Vaulx RD, Pollacsek M, Beckert M, Gallais A. Doubled haploid versus S1 family recurrent selection for testcross performance in a maize population. Theor Appl Genet, 2006, 112(6): 1063-1072,

DOI

6
Chen S, Zhou Y, Chen Y, Gu J. fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics, 2018, 34(17): i884-i890,

DOI

7
Daccord N, Celton JM, Linsmith G, Becker C, Choisne N, Schijlen E, van de Geest H, Bianco L, Micheletti D, Velasco R, Di Pierro EA, Gouzy J, Rees JG, Guérif P, Muranty H, Durel CE, Laurens F, Lespinasse Y, Gaillard S, Aubourg S, Quesneville H, Weigel D, van de Weg E, Troggio M, Bucher E. High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development. Nat Genet, 2017, 49(7): 1099-1106,

DOI

8
Deutsch F, Kumlehn J, Ziegenhagen B, Fladung M. Stable haploid poplar callus lines from immature pollen culture. Physiol Plant, 2004, 120(4): 613-622,

DOI

9
Douglas CJ. Groover A, Cronk Q. Populus as a model tree. Comparative and evolutionary genomics of angiosperm trees, 2017 Berlin Springer 61-84,

DOI

10
Gitlin L, Karelsky S, Andino R. Short interfering RNA confers intracellular antiviral immunity in human cells. Nature, 2002, 418(6896): 430-434,

DOI

11
Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nuclc Acids Symposium Series, 1999, 41(41): 95-98,

DOI

12
Hamrick JL, Mitton JB, Linhart YB (1981) Levels of Genetic Variation in Trees: Influence of life history characteristics. Gen. Tech. Rep. PSW-GTR-48. Berkeley, CA: Pacific Southwest Forest and Range Exp. Stn, Forest Service, U.S. Department of Agriculture. pp. 35−41.

13
Huang X, Chen S, Peng X, Bae EK, Dai X, Liu G, Qu G, Ko JH, Lee H, Chen S, Li Q, Lu M. An improved draft genome sequence of hybrid Populus alba × Populus glandulosa. J for Res, 2021, 32: 1663-1672,

DOI

14
Illies ZM. Induction of haploid parthenogenesis in aspen by post-pollination treatment with Toluidine-blue. Silvae Genet, 1974, 23: 221-226

15
Ingvarsson PK, Bernhardsson C. Genome-wide signatures of environmental adaptation in European aspen (Populus tremula) under current and future climate conditions. Evol Appl, 2020, 13(1): 132-142,

DOI

16
Jha KK. Biomass production and carbon balance in two hybrid poplar (Populus euramericana) plantations raised with and without agriculture in southern France. J for Res, 2018, 29: 1689-1701,

DOI

17
Lawrence EJ, Griffin CH, Henderson IR. Modification of meiotic recombination by natural variation in plants. J Exp Bot, 2017, 68(20): 54711-55483,

DOI

18
Lee GH, Kang IK, Kim KM. Mapping of Novel QTL Regulating grain shattering using doubled haploid population in rice (Oryza sativa L.). Int J Genomics, 2016, 2016: 2128010,

DOI

19
Li Y, Li H, Chen Z, Ji LX, Ye MX, Wang J, Wang L, An XM. Haploid plants from anther cultures of poplar (Populus × beijingensis). Plant Cell Tiss Organ Cult, 2013, 114(1): 39-48,

DOI

20
Liu B, Shi Y, Yuan J, Hu X, Zhang H, Li N, Li Z, Chen Y, Mu D, Fan W. Estimation of genomic characteristics by analyzing k-mer frequency in de novo genome projects. Quant Biol, 2013, 35(s1–3): 62-67,

DOI

21
Liu B, Wang S, Tao X, Liu C, Qu G, Dou Q. Molecular karyotyping on Populus simonii × P. nigra and the derived doubled haploid. Int J Mol Sci, 2021, 22(21): 11424,

DOI

22
Mayor PJ, Bernardo R. Genomewide selection and marker-assisted recurrent selection in doubled haploid versus F2 populations. Crop Sci, 2009, 49(5): 1719-1725,

DOI

23
Murashige T, Skoog F. A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiol Plant, 1962, 15(3): 473-497,

DOI

24
Namkoong G, Bishir J. The frequency of lethal alleles in forest tree populations. Evolution, 1987, 41(5): 1123-1126,

DOI

25
Pillen K, Zacharias A, Léon J. Advanced backcross QTL analysis in barley (Hordeum vulgare L.). Theor Appl Genet, 2003, 107(2): 340-352,

DOI

26
Porebski S, Bailey LG, Baum BR. Modification of a CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components. Plant Mol Biol Rep, 1997, 15(1): 8-15,

DOI

27
Porth I, El-Kassaby YA. Assessment of the genetic diversity in forest tree populations using molecular markers. Diversity, 2014, 6(2): 283-295,

DOI

28
Raymond O, Gouzy J, Just J, Badouin H, Verdenaud M, Lemainque A, Vergne P, Moja S, Choisne N, Pont C, Carrère S, Caissard JC, Couloux A, Cottret L, Aury JM, Szécsi J, Latrasse D, Madoui MA, François L, Fu X, Yang SH, Dubois A, Piola F, Larrieu A, Perez M, Labadie K, Perrier L, Govetto B, Labrousse Y, Villand P, Bardoux C, Boltz V, Lopez-Roques C, Heitzler P, Vernoux T, Vandenbussche M, Quesneville H, Boualem A, Bendahmane A, Liu C, Le Bris M, Salse J, Baudino S, Benhamed M, Wincker P, Bendahmane M. The Rosa genome provides new insights into the domestication of modern roses. Nat Genet, 2018, 50(6): 772-777,

DOI

29
Seymour DK, Filiault DL, Henry IM, Monson-Miller J, Ravi M, Pang A, Comai L, Chan SW, Maloof JN. Rapid creation of Arabidopsis doubled haploid lines for quantitative trait locus mapping. Proc Natl Acad Sci, 2012, 109(11): 4227-4232,

DOI

30
Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Déjardin A, Depamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjärvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leplé JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson DR, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouzé P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D. The genome of black cottonwood, Populus trichocarpa (Torr & Gray). Science, 2006, 313(5793): 1596-1604,

DOI

31
Ueta R, Abe C, Watanabe T, Sugano SS, Ishihara R, Ezura H, Osakabe Y, Osakabe K. Rapid breeding of parthenocarpic tomato plants using CRISPR/Cas9. Sci Rep, 2017, 7(1): 507,

DOI

32
Winton LL, Einspahr DW. The use of heat-treated pollen for aspen haploid production. For Sci, 1968, 14(4): 406-407,

DOI

33
Yang J, Li K, Li C, Li J, Zhao B, Zheng W, Gao Y, Li C. In vitro anther culture and Agrobacterium-mediated transformation of the AP1 gene from Salix integra Linn. in haploid poplar (Populus simonii × P. nigra). J for Res, 2017, 29(2): 321-330,

DOI

34
Zhou X, Jacobs TB, Xue LJ, Harding SA, Tsai CJ. Exploiting SNPs for biallelic CRISPR mutations in the outcrossing woody perennial Populus reveals 4-coumarate:CoA ligase specificity and redundancy. New Phytol, 2015, 208(2): 298-301,

DOI

Options
文章导航

/

〈 〉

[an error occurred while processing this directive]